Uses of Interface com.actelion.research.chem.phesa.pharmacophore.pp.IPharmacophorePoint (OpenChemLib 2022.2.1 API)

Packages that use IPharmacophorePoint
Package Description

com.actelion.research.chem.phesa.pharmacophore

com.actelion.research.chem.phesa.pharmacophore.pp

Uses of IPharmacophorePoint in com.actelion.research.chem.phesa.pharmacophore

Methods in com.actelion.research.chem.phesa.pharmacophore that return types with arguments of type IPharmacophorePoint
Modifier and Type	Method	Description
`static java.util.List<IPharmacophorePoint>`	PharmacophoreCalculator.`getPharmacophorePoints(StereoMolecule mol)`

Constructors in com.actelion.research.chem.phesa.pharmacophore with parameters of type IPharmacophorePoint
Constructor	Description
`PPTriangle(IPharmacophorePoint pp1, IPharmacophorePoint pp2, IPharmacophorePoint pp3, double d12, double d13, double d23, Coordinates molCom)`

Uses of IPharmacophorePoint in com.actelion.research.chem.phesa.pharmacophore.pp

Classes in com.actelion.research.chem.phesa.pharmacophore.pp that implement IPharmacophorePoint
Modifier and Type	Class	Description
`class`	`AcceptorPoint`
`class`	`AliphaticPoint`
`class`	`AromRingPoint`
`class`	`ChargePoint`
`class`	`DonorPoint`
`class`	`ExitVectorPoint`
`class`	`SimplePharmacophorePoint`	doesn't possess directionality terms (only a dummy vector) and is used to represent receptor pharmacophores (not dependent on a molecular conformation, as opposed to ligand-based pharmacophores)

Methods in com.actelion.research.chem.phesa.pharmacophore.pp that return IPharmacophorePoint
Modifier and Type	Method	Description
`IPharmacophorePoint`	AcceptorPoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	AliphaticPoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	AromRingPoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	ChargePoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	DonorPoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	ExitVectorPoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	IPharmacophorePoint.`copyPharmacophorePoint()`
`IPharmacophorePoint`	SimplePharmacophorePoint.`copyPharmacophorePoint()`
`static IPharmacophorePoint`	PharmacophorePointFactory.`fromString(java.lang.String ppString, StereoMolecule mol)`
`IPharmacophorePoint`	PPGaussian.`getPharmacophorePoint()`

Methods in com.actelion.research.chem.phesa.pharmacophore.pp with parameters of type IPharmacophorePoint
Modifier and Type	Method	Description
`double`	AcceptorPoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	AliphaticPoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	AromRingPoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	ChargePoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	DonorPoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	ExitVectorPoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	IPharmacophorePoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	SimplePharmacophorePoint.`getSimilarity(IPharmacophorePoint pp)`
`double`	AliphaticPoint.`getVectorSimilarity(IPharmacophorePoint pp2)`
`double`	AliphaticPoint.`getVectorSimilarity(IPharmacophorePoint pp2, Coordinates directionalityMod)`
`double`	AromRingPoint.`getVectorSimilarity(IPharmacophorePoint pp2)`
`double`	AromRingPoint.`getVectorSimilarity(IPharmacophorePoint pp2, Coordinates directionalityMod)`
`double`	ChargePoint.`getVectorSimilarity(IPharmacophorePoint pp2)`
`double`	ChargePoint.`getVectorSimilarity(IPharmacophorePoint pp2, Coordinates directionalityMod)`
`default double`	IPharmacophorePoint.`getVectorSimilarity(IPharmacophorePoint pp2)`
`default double`	IPharmacophorePoint.`getVectorSimilarity(IPharmacophorePoint pp2, Coordinates directionalityMod)`
`double`	SimplePharmacophorePoint.`getVectorSimilarity(IPharmacophorePoint pp2, Coordinates directionalityMod)`

Constructors in com.actelion.research.chem.phesa.pharmacophore.pp with parameters of type IPharmacophorePoint
Constructor	Description
`PPGaussian(int atomicNo, IPharmacophorePoint pp)`