Deprecated API

Contents

• Classes
• Fields
• Methods
• Constructors

• Deprecated Classes

  Class

  Description

  ij.plugin.filter.Duplicater

  replaced by ij.plugin.Duplicator class

  ij.plugin.filter.Info

  replaced by ij.plugin.ImageInfo

  ij.plugin.filter.Writer

   

• Deprecated Fields

  Field

  Description

  ij.gui.Plot.BOTTOM_MARGIN

  Not a fixed value any more, use getDrawingFrame() to get the drawing area

  ij.gui.Plot.LEFT_MARGIN

  Not a fixed value any more, use getDrawingFrame() to get the drawing area

  ij.gui.Plot.RIGHT_MARGIN

  Not a fixed value any more, use getDrawingFrame() to get the drawing area

  ij.gui.Plot.TOP_MARGIN

  Not a fixed value any more, use getDrawingFrame() to get the drawing area

  ij.gui.PlotWindow.BOX

   

  ij.gui.PlotWindow.CIRCLE

   

  ij.gui.PlotWindow.CROSS

   

  ij.gui.PlotWindow.LINE

   

  ij.gui.PlotWindow.TRIANGLE

   

  ij.gui.PlotWindow.X

   

  ij.IJ.URL

   

  ij.measure.CurveFitter.IterFactor

  now in the Minimizer class (since ImageJ 1.46f). (probably of not much value for anyone anyhow?)

• Deprecated Methods

  Method

  Description

  ij.gui.ImageCanvas.getDisplayList()

  replaced by ImagePlus.getOverlay()

  ij.gui.ImageCanvas.setDisplayList(Roi, Color)

  replaced by ImagePlus.setOverlay(Roi, Color, int, Color)

  ij.gui.ImageCanvas.setDisplayList(Shape, Color, BasicStroke)

  replaced by ImagePlus.setOverlay(Shape, Color, BasicStroke)

  ij.gui.ImageCanvas.setDisplayList(Vector)

  replaced by ImagePlus.setOverlay(ij.gui.Overlay)

  ij.gui.NewImage.createUnsignedShortImage(String, int, int, int, int)

  Short images are always unsigned.

  ij.gui.Plot.drawArrow(int, int, int, int, double)

  Use as a public method is not supported any more because it is incompatible with rescaling

  ij.gui.PlotWindow.addErrorBars(float[])

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.addLabel(double, double, String)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.addPoints(double[], double[], int)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.addPoints(float[], float[], int)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.changeFont(Font)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.setColor(Color)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.setLimits(double, double, double, double)

  use the corresponding method of the Plot class

  ij.gui.PlotWindow.setLineWidth(int)

  use the corresponding method of the Plot class

  ij.gui.PointRoi.getDefaultMarkerSize()

   

  ij.gui.PointRoi.setDefaultMarkerSize(String)

   

  ij.gui.PointRoi.setHideLabels(boolean)

   

  ij.gui.Roi.convertToPolygon()

   

  ij.gui.Roi.drawPixels()

  replaced by drawPixels(ImageProcessor)

  ij.gui.Roi.getBoundingRect()

  replaced by getBounds()

  ij.gui.Roi.getDrawOffset()

  Drawoffset is not used any more.

  ij.gui.Roi.setDrawOffset(boolean)

  This method was previously used to draw lines and polylines shifted by 0.5 pixels top the bottom and right, for better agreement with the position used by ProfilePlot, with the default taken from Prefs.subPixelResolution. Now the shift is independent of this setting and only depends on the ROI type (area or line/point ROI).

  ij.gui.Roi.setInstanceColor(Color)

  replaced by setStrokeColor()

  ij.gui.Roi.setLineWidth(int)

  replaced by setStrokeWidth(int)

  ij.gui.TextRoi.getFont()

  Replaced by getDefaultFontName

  ij.gui.TextRoi.getSize()

  Replaced by getDefaultFontSize

  ij.gui.TextRoi.getStyle()

  Replaced by getDefaultFontStyle

  ij.gui.TextRoi.setCurrentFont(Font)

  Replaced by setFont(font)

  ij.gui.Toolbar.getColor()

  replaced by getForegroundColor()

  ij.gui.Toolbar.setColor(Color)

  replaced by setForegroundColor()

  ij.IJ.write(String)

  replaced by IJ.log(), ResultsTable.setResult() and TextWindow.append(). There are examples at http://imagej.nih.gov/ij/plugins/sine-cosine.html

  ij.ImagePlus.isStack()

  Replaced by ImagePlus.hasImageStack()

  ij.ImageStack.addUnsignedShortSlice(String, Object)

  Short images are always unsigned.

  ij.measure.ResultsTable.addLabel(String, String)

  Replaced by setValue(String,int,String)

  ij.measure.ResultsTable.getValue(int, int)

  replaced by getValueAsDouble

  ij.measure.ResultsTable.setHeading(int, String)

  Replaced by addValue(String,double) and setValue(String,int,double)

  ij.plugin.filter.Filler.clearOutside(ImageProcessor)

  replaced by ImageProcessor.fillOutside(Roi)

  ij.plugin.filter.Filler.draw(ImageProcessor)

  replaced by ImageProcessor.draw(Roi)

  ij.plugin.filter.Filler.fill(ImageProcessor)

  replaced by ImageProcessor.fill(Roi)

  ij.plugin.filter.GaussianBlur.blur(ImageProcessor, double)

  ij.plugin.filter.RankFilters.makeKernel(double)

  Not needed any more, use the rank(ip, ...) method, which creates the kernel

  ij.plugin.frame.RoiManager.getList()

   

  ij.plugin.frame.RoiManager.getROIs()

   

  ij.plugin.ImageCalculator.calculate(String, ImagePlus, ImagePlus)

  replaced by run(String,ImagePlus,ImagePlus)

  ij.process.ImageProcessor.drawDot2(int, int)

   

  ij.process.ImageProcessor.hideProgress()

   

  ij.process.ImageProcessor.isKillable()

   

  ij.process.ImageProcessor.translate(int, int, boolean)

  replaced by translate(x,y)

• Deprecated Constructors

  Constructor

  Description

  ij.gui.Line(int, int, int, int, ImagePlus)

  replaced by Line(int, int, int, int)

  ij.gui.OvalRoi(int, int, int, int, ImagePlus)

   

  ij.gui.Plot(String, String, String, double[], double[])

   

  ij.gui.Plot(String, String, String, double[], double[], int)

   

  ij.gui.Plot(String, String, String, float[], float[])

   

  ij.gui.Plot(String, String, String, float[], float[], int)

   

  ij.gui.Plot(String, String, String, String, float[], float[])

   

  ij.gui.PlotWindow(String, String, String, double[], double[])

  replaced by the Plot class.

  ij.gui.PlotWindow(String, String, String, float[], float[])

  replaced by the Plot class.

  ij.gui.PolygonRoi(int[], int[], int, ImagePlus, int)

   

  ij.gui.Roi(int, int, int, int, ImagePlus)

   

  ij.gui.TextRoi(int, int, String, Font, Color)

   

  ij.process.ShortProcessor(int, int, short[], ColorModel, boolean)

  16 bit images are normally unsigned but signed images can be simulated by subtracting 32768 and using a calibration function to restore the original values.